Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:5293652:5323281 Pseudomonas putida GB-1 chromosome, complete genome

Start: 5323281, End: 5324156, Length: 876

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1885613:193009619300961930971876Pseudomonas putida ND6 chromosome, complete genometranscriptional regulator-like protein2e-169594
NC_009512:5166459:518413251841325185007876Pseudomonas putida F1, complete genometranscriptional regulator-like protein2e-169594
NC_012660:3320330:333529333352933336165873Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-119428
NC_009434:3611738:373763837376383738405768Pseudomonas stutzeri A1501, complete genomehypothetical protein7e-105380
NC_015740:3631326:365297736529773653804828Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-104377
NC_018691:3437821:345500234550023455898897Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein3e-77288
NC_009656:6224221:624993162499316250773843Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-75282
NC_016613:2139276:214296521429652143819855Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein3e-73275
NC_002505:1892430:192188519218851922745861Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein3e-73275
NC_009457:1444449:147498814749881475848861Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein3e-73275
NC_012578:1838470:186901818690181869878861Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein3e-73275
NC_012582:1976962:200640720064072007267861Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein3e-73275
NC_012668:1688500:172476317247631725623861Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-73275
NC_016445:1363831:139328513932851394145861Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein3e-73275
NC_016944:1937645:196819319681931969053861Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-73275
NC_005139:2201820:223301622330162233879864Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-72273
NC_009901:1516340:153236015323601533223864Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein9e-71266
NC_008577:2511326:251397125139712514882912Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein7e-65247
NC_005139:2201820:226343722634372264276840Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-64246
NC_007481:3167434:318037231803723181232861Pseudoalteromonas haloplanktis TAC125 chromosome I, completehypothetical protein7e-64244
NC_015740:3678342:370449037044903705359870Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein8e-57220
NC_010995:2798000:281061628106162811452837Cellvibrio japonicus Ueda107, complete genomehypothetical protein1e-56219
NC_010404:55908:684116841169292882Acinetobacter baumannii plasmid p3ABAYE, complete sequencehypothetical protein6e-56218
NC_012912:1053618:106182510618251062664840Dickeya zeae Ech1591, complete genomehypothetical protein4e-43175
NC_017075:1837966:185807818580781859037960Rubrivivax gelatinosus IL144, complete genomehypothetical protein1e-40166
NC_009049:1934398:194163519416351942522888Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencehypothetical protein2e-40166
NC_015259:485015:545307545307546179873Polymorphum gilvum SL003B-26A1 chromosome, complete genomePredicted transcriptional regulator4e-40165
NC_008686:1472899:149974814997481500635888Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein7e-40164
NC_010814:243384:255976255976256827852Geobacter lovleyi SZ, complete genomehypothetical protein3e-38159
NC_010002:3002354:301242130124213013323903Delftia acidovorans SPH-1, complete genomehypothetical protein9e-38157
NC_009429:622359:643046643046643918873Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein3e-37155
NC_012880:1127997:112993011299301130835906Dickeya dadantii Ech703, complete genomehypothetical protein5e-37154
NC_010725:3315007:333208333320833332931849Methylobacterium populi BJ001, complete genomehypothetical protein1e-36153
NC_008686:2080770:208452320845232085431909Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein6e-36151
NC_007794:2304768:232027623202762321145870Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein6e-36151
NC_015259:734795:746799746799747677879Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator3e-35149
NC_009720:750612:764693764693765556864Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-33143
NC_014910:4316706:432672643267264327589864Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-33142
NC_010943:2499092:250523425052342506181948Stenotrophomonas maltophilia K279a, complete genomehypothetical protein8e-33140
NC_007086:2887875:294430529443052945219915Xanthomonas campestris pv. campestris str. 8004, complete genomePredicted transcriptional regulator3e-32139
NC_011283:2836000:288569128856912886545855Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-32139
NC_003919:4618988:464463946446394645520882Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein7e-32137
NC_020409:2222000:223504422350442235865822Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-31136
NC_014414:1140357:1168240116824011692441005Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein1e-30133
NC_009434:608765:668716668716669672957Pseudomonas stutzeri A1501, complete genometranscriptional regulator5e-29128
NC_007498:134442:150751150751151689939Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein9e-28124
NC_011662:317831:328451328451329338888Thauera sp. MZ1T, complete genomehypothetical protein7e-27121
NC_016445:89500:109548109548110468921Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-26120
NC_010554:2646806:272159627215962722519924Proteus mirabilis HI4320, complete genomeplasmid-related protein2e-26120
NC_007509:3668:215102151022316807Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein3e-26119
NC_018691:3496420:350707235070723507902831Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator5e-25115
NC_008740:443274:479134479134480018885Marinobacter aquaeolei VT8, complete genomehypothetical protein1e-24114
NC_015663:2090442:209594320959432096836894Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-23110
NC_015422:910292:923884923884924774891Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-22106
NC_004431:5123325:512660351266035127508906Escherichia coli CFT073, complete genomehypothetical protein7e-22104
NC_008322:2077628:209912820991282100009882Shewanella sp. MR-7, complete genomehypothetical protein1e-21103
NC_012691:2476223:249694124969412497831891Tolumonas auensis DSM 9187, complete genomehypothetical protein7e-21101
NC_008786:2729635:273526227352622736161900Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein1e-20100
NC_004757:2730057:275170227517022752607906Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein2e-2099.8
NC_015379:908904:938894938894939808915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-2099.4
NC_010170:4409683:441923244192324420140909Bordetella petrii, complete genomehypothetical protein3e-2099
NC_004757:2730057:274742827474282748342915Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein6e-2098.2
NC_010170:4463000:448229344822934483201909Bordetella petrii, complete genomehypothetical protein1e-1997.1
NC_010002:4572573:461159546115954612503909Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1997.1
NC_011992:3375929:339429333942933395210918Acidovorax ebreus TPSY, complete genomehypothetical protein5e-1995.1
NC_011770:2499432:252217325221732523087915Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator-like6e-1994.7
NC_007651:72952:130914130914131828915Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-1790.1
NC_015740:2407500:243613724361372437057921Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-1789.4
NC_010512:1015557:103454010345401035481942Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein4e-1788.6
NC_008700:2451798:246686324668632467735873Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein6e-1788.2
NC_015572:1:311393113931831693Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-1583.2
NC_004459:3243987:326094132609413261654714Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator1e-1377
NC_007651:1620000:162983716298371630751915Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein3e-1376.3
NC_020260:3931567:394095539409553941821867Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-1273.6
NC_008577:2604281:263014126301412631034894Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-1170.1
NC_013166:32474:480674806748936870Kangiella koreensis DSM 16069, complete genomehypothetical protein2e-1169.7
NC_014965:997344:100515710051571006059903Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein5e-1168.6
NC_015740:3631326:365632136563213656479159Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-0858.5