Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:1:14522 Pseudomonas putida GB-1 chromosome, complete genome

Start: 14522, End: 14854, Length: 333

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1:137401374014072333Pseudomonas putida F1, complete genomehypothetical protein1e-59227
NC_010501:1:137601376014092333Pseudomonas putida W619, complete genomehypothetical protein1e-59227
NC_010501:5735656:574322357432235743555333Pseudomonas putida W619, complete genomehypothetical protein8e-48188
NC_002947:6123608:612879661287966129128333Pseudomonas putida KT2440, complete genomehypothetical protein3e-46183
NC_009439:2427120:244899224489922449324333Pseudomonas mendocina ymp, complete genomehypothetical protein1e-36151
NC_009434:3611738:364843236484323648761330Pseudomonas stutzeri A1501, complete genomehypothetical protein1e-31135
NC_018080:3088866:312001231200123120263252Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-26117
NC_015733:5955467:596497159649715965093123Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-1375.1
NC_009512:27783:577035770358026324Pseudomonas putida F1, complete genomehypothetical protein1e-1168.6
NC_010501:30000:624196241962742324Pseudomonas putida W619, complete genomehypothetical protein1e-1168.6
NC_010322:29983:584855848558808324Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-1168.6
NC_017986:2548720:259190225919022592225324Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-1168.6
NC_015733:5909821:593949659394965939819324Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-1167
NC_008027:4280000:430236843023684302625258Pseudomonas entomophila L48, complete genomehypothetical protein2e-0960.8
NC_002947:8394:457274572745939213Pseudomonas putida KT2440, complete genomehypothetical protein5e-0959.7
NC_012660:5242392:524958052495805249849270Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-0857.8
NC_009439:2427120:244106724410672441327261Pseudomonas mendocina ymp, complete genomehypothetical protein5e-0856.2
NC_010322:29983:446354463544961327Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-0754.3
NC_010501:30000:485694856948895327Pseudomonas putida W619, complete genomehypothetical protein2e-0754.3
NC_009512:27783:438534385344179327Pseudomonas putida F1, complete genomehypothetical protein2e-0754.3
NC_017986:2548720:257805525780552578381327Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-0753.9
NC_015733:5909821:593430759343075934633327Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-0753.9
NC_002947:8394:318773187732203327Pseudomonas putida KT2440, complete genomehypothetical protein1e-0652