Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:1:11818 Pseudomonas putida GB-1 chromosome, complete genome

Start: 11818, End: 13734, Length: 1917

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1:1103611036129521917Pseudomonas putida F1, complete genomehypothetical protein01314
NC_002947:8394:2019820198221141917Pseudomonas putida KT2440, complete genomehypothetical protein01314
NC_010501:1:1105611056129721917Pseudomonas putida W619, complete genomehypothetical protein01314
NC_015572:1:1800918009197301722Methylomonas methanica MC09 chromosome, complete genomeregulatory protein MerR5e-43176
NC_014539:1:2137821378233091932Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein5e-36153
NC_015572:1:4560745607474631857Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-1791.3
NC_004578:20738:3688136881387671887Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1585.5
NC_020829:1:3009030090320181929Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-1275.1
NC_020209:4768500:4792377479237747942991923Pseudomonas poae RE*1-1-14, complete genomehypothetical protein5e-0963.5
NC_011662:1:2502325023266331611Thauera sp. MZ1T, complete genomehypothetical protein1e-0862.4
NC_007509:3668:285622856229530969Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein5e-0860.1
NC_007517:3430237:3437926343792634391191194Geobacter metallireducens GS-15, complete genomehypothetical protein7e-0756.2