Pre_GI: BLASTP Hits

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Query: NC_010168:1373337:1380117 Renibacterium salmoninarum ATCC 33209 chromosome, complete genome

Start: 1380117, End: 1382096, Length: 1980

Host Lineage: Renibacterium salmoninarum; Renibacterium; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This bacterial pathogen is the causal agent of bacterial kidney disease (BKD) of salmonid fish. This disease is a significant threat to the healthy and sustainable production of salmon for consumption and species conservation efforts in the USA. The development of treatments are further complicated as the organism is vertically transmitted from infected females to their eggs, is difficult to culture in vitro, and is a facultative intracellular pathogen. The completion of the genome sequence of Renibacterium salmoninarum will be a benefit to the scientific community at many levels and will be of immediate use to researchers and fish health practitioners dealing with BKD in farmed fish as well as captive broodstocks of endangered species-listed populations. For example, genome data will serve as a foundation for identification of virulence factors, DNA vaccine gene candidates, and improved diagnostic tests.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015145:2693749:2717095271709527190982004Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein2e-175616
NC_011886:2696671:2713962271396227159772016Arthrobacter chlorophenolicus A6, complete genomehypothetical protein3e-151535
NC_010617:988758:9897659897659917982034Kocuria rhizophila DC2201, complete genomehypothetical protein2e-67257
NC_015145:2942500:2948418294841829503641947Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein3e-48193
NC_013204:2371499:2384396238439623864832088Eggerthella lenta DSM 2243, complete genomehypothetical protein1e-25119
NC_017221:73864:8501185011871012091Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein4e-23110
NC_014363:645397:6560816560816581922112Olsenella uli DSM 7084 chromosome, complete genomehypothetical protein2e-21104
NC_013530:2819569:2822801282280128248732073Xylanimonas cellulosilytica DSM 15894, complete genomehypothetical protein6e-1479.7