Pre_GI: BLASTP Hits

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Query: NC_010102:931055:952498 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 952498, End: 952965, Length: 468

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2612822:261407926140792614552474Escherichia coli O111:H- str. 11128, complete genomeDNA gyrase inhibitor SbmC1e-63241
NC_009436:2776410:278195827819582782431474Enterobacter sp. 638, complete genomeDNA gyrase inhibitor5e-63239
NC_011740:2072173:207896220789622079429468Escherichia fergusonii ATCC 35469, complete genomeDNA gyrase inhibitor; in high copy protects cells from replication inhibitor MccB17; SOS induced; blocks MccB17 export (SbmC protein)1e-61234
NC_015663:4950000:495312449531244953597474Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA gyrase inhibitor2e-56218
NC_014306:3210311:321341032134103213877468Erwinia billingiae Eb661, complete genomeDNA gyrase inhibitor2e-38157
NC_015566:3269469:327511032751103275580471Serratia sp. AS12 chromosome, complete genometranscription activator effector binding protein3e-24110
NC_009832:3313058:332560133256013326071471Serratia proteamaculans 568, complete genometranscription activator effector binding2e-2097.8
NC_012917:1840172:184648218464821846946465Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscription activator effector binding9e-1682.4
NC_012881:2957309:296953829695382969999462Desulfovibrio salexigens DSM 2638, complete genometranscription activator effector binding3e-0857.8
NC_010002:3399770:341701734170173417997981Delftia acidovorans SPH-1, complete genometranscriptional regulator, AraC family4e-0650.4