Pre_GI: BLASTP Hits

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Query: NC_010102:683444:714027 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 714027, End: 714140, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2324293:233123723312372331527291Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein1e-1478.6
NC_016860:2323017:232703523270352327325291Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein1e-1478.6
NC_016857:2325190:232920823292082329498291Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein1e-1478.6
NC_016856:2379027:238304523830452383335291Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein1e-1478.6
NC_016810:2325190:232920823292082329498291Salmonella enterica subsp. enterica serovar Typhimurium strputative SsrB-regulated factor1e-1478.6
NC_003197:2327474:233149223314922331782291Salmonella typhimurium LT2, complete genomevirulence protein1e-1478.6
NC_017046:2324554:232874923287492328862114Salmonella enterica subsp. enterica serovar Typhimurium str. 798SsrB-regulated factor3e-1477
NC_011083:2375061:237925623792562379369114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,virulence protein3e-1477
NC_020181:5217000:524473352447335244972240Enterobacter aerogenes EA1509E, complete genomeVirulence protein MsgA3e-0650.8