Pre_GI: BLASTP Hits

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Query: NC_010102:4557037:4568364 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4568364, End: 4568987, Length: 624

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:537000:551376551376551984609Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-90331
NC_012214:3303955:330687433068743307482609Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-90331
NC_014121:489500:509444509444510055612Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-79295
NC_016816:4129299:417475241747524175363612Pantoea ananatis LMG 5342, complete genomehypothetical protein8e-71266
NC_009832:4482500:449905744990574499659603Serratia proteamaculans 568, complete genomehypothetical protein2e-1789.4
NC_009832:4564752:457988245798824580484603Serratia proteamaculans 568, complete genomehypothetical protein6e-1787.4
NC_014029:331919:389174389174389776603Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-1684
NC_015566:345084:370976370976371578603Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-1582.8
NC_015567:346500:371162371162371764603Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-1582.8
NC_009832:426993:442525442525443127603Serratia proteamaculans 568, complete genomehypothetical protein4e-1581.3
NC_016845:4498097:450651645065164507121606Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1170.1