Pre_GI: BLASTP Hits

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Query: NC_010102:4557037:4561162 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4561162, End: 4561926, Length: 765

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010801:550270:550270550270550680411Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein1e-37156
NC_011149:2040396:204326020432602043622363Salmonella enterica subsp. enterica serovar Agona str. SL483,arsenical resistance operon trans-acting repressor ArsD8e-1270.9
NC_011992:2279752:228704622870462287414369Acidovorax ebreus TPSY, complete genomeArsenical resistance operon trans-acting repressor ArsD4e-1168.6
NC_018080:6048516:607025860702586070620363Pseudomonas aeruginosa DK2 chromosome, complete genomearsenic operon regulator4e-1065.5
NC_018867:179975:196294196294196728435Dehalobacter sp. CF chromosome, complete genomehypothetical protein1e-0963.5
NC_018866:108812:128699128699129133435Dehalobacter sp. DCA chromosome, complete genomehypothetical protein1e-0963.5
NC_007908:4069150:408661640866164086999384Rhodoferax ferrireducens T118, complete genomeArsenical resistance operon trans-acting repressor ArsD3e-0962.4
NC_021064:31816:441784417844588411Propionibacterium avidum 44067, complete genomeArsenical resistance operon trans-acting repressor ArsD4e-0755.5
NC_010102:4557037:456192745619274562289363Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0754.7
NC_014394:2577949:258273925827392583107369Gallionella capsiferriformans ES-2 chromosome, complete genomeArsenical resistance operon trans-acting repressor ArsD2e-0653.1