Pre_GI: BLASTP Hits

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Query: NC_010102:2881714:2893633 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2893633, End: 2893740, Length: 108

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:2896630:294963629496362949833198Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-1271.2
NC_011083:2847318:290391229039122904109198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1271.2
NC_011080:2897977:290604129060412906238198Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1271.2
NC_016831:2779864:279169127916912791888198Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1167.8
NC_012125:2826624:286461728646172864814198Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1167.8
NC_011205:2962270:297409529740952974292198Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-1167.8
NC_011094:2791719:283652828365282836725198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1167.8
NC_016832:2743801:275562027556202755814195Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1167