Pre_GI: BLASTP Hits

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Query: NC_010102:283364:305793 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 305793, End: 306245, Length: 453

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014624:1369642:137157213715721372153582Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein9e-2095.5
NC_016935:3103430:311113131111313111706576Paenibacillus mucilaginosus 3016 chromosome, complete genomelysine exporter protein LysE/YggA2e-1374.7
NC_015690:2553837:256160425616042562179576Paenibacillus mucilaginosus KNP414 chromosome, complete genomelysine exporter protein LysE/YggA2e-1374.7
NC_020244:4020315:402328040232804023831552Bacillus subtilis XF-1, complete genomelysine exporter protein1e-1272
NC_006322:567987:584818584818585396579Bacillus licheniformis ATCC 14580, complete genomeLysE4e-1167
NC_006270:568171:585028585028585606579Bacillus licheniformis ATCC 14580, complete genomeLysine exporter protein4e-1167
NC_012917:4328463:433043543304354331037603Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeLysine exporter protein (LYSE/YGGA)1e-0962
NC_015424:748785:772587772587773183597Aeromonas veronii B565 chromosome, complete genomehypothetical protein1e-0858.9
NC_018643:857911:887828887828888418591Alpha proteobacterium HIMB5 chromosome, complete genomeLysE type translocator1e-0858.5
NC_009348:3819271:384406838440683844664597Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein5e-0856.6
NC_014540:1835493:185317018531701853796627Burkholderia sp. CCGE1003 chromosome 2, complete sequencelysine exporter protein LysE/YggA4e-0753.5
NC_020410:3868573:387097138709713871549579Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeLysine exporter protein5e-0753.5
NC_019842:3921424:392142439214243922128705Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein5e-0753.1
NC_014532:2298628:229862822986282299227600Halomonas elongata DSM 2581, complete genomehypothetical protein3e-0650.8