Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1853025 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1853025, End: 1854176, Length: 1152

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011741:2715246:2736997273699727381421146Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-147522
CU928160:2715246:2736997273699727381421146Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from bacteriophage origin1e-147522
NC_016845:2306744:2307188230718823083331146Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative bacteriophage protein3e-145514
NC_014562:1772842:1776001177600117771461146Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-138492
NC_007712:2806500:2834042283404228355201479Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-93343
NC_009720:4033983:4055637405563740571121476Xanthobacter autotrophicus Py2, complete genomehypothetical protein7e-65248
NC_009255:1369200:1372561137256113740361476Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-60233
NC_008343:1743500:1765626176562617667021077Granulibacter bethesdensis CGDNIH1, complete genomehypothetical protein2e-23110
NC_009633:4485869:4486979448697944879831005Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein1e-0757.8
NC_016935:6464201:6464201646420164652171017Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0653.1