Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1852573 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1852573, End: 1853013, Length: 441

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:2306744:230834423083442308784441Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Putative bacteriophage protein4e-68256
NC_011741:2715246:273654627365462736986441Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-66251
CU928160:2715246:273654627365462736986441Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from bacteriophage origin1e-66251
NC_007712:2287053:231034423103442310784441Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein8e-61231
NC_014562:1772842:177555017755501775990441Pantoea vagans C9-1 chromosome, complete genomeputative bacteriophage protein1e-59228
NC_007712:2806500:283358928335892834029441Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-58224
NC_009255:1369200:137459013745901375030441Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative bacteriophage protein3e-48190
NC_009720:4033983:405715740571574057573417Xanthobacter autotrophicus Py2, complete genomeputative bacteriophage protein1e-35148
NC_008343:1743500:176515317651531765599447Granulibacter bethesdensis CGDNIH1, complete genomehypothetical protein5e-0649.7