Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1836204 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1836204, End: 1836452, Length: 249

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:2745097:275936227593622759619258Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeexcisionase1e-37154
NC_011415:2153243:216574121657412165977237Escherichia coli SE11 chromosome, complete genomeputative phage excisionase6e-31132
NC_021066:2226826:224960622496062249854249Raoultella ornithinolytica B6, complete genomeexcisionase1e-27121
NC_015663:4767443:479152247915224791770249Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage excisionase2e-1890.5
NC_009778:1556222:156231915623191562609291Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1787.4
NC_020260:1615135:162123216212321621483252Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-1786.7
NC_013361:1558423:156036115603611560645285Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexcisionase2e-1684.7
NC_013364:1183000:118494711849471185231285Escherichia coli O111:H- str. 11128, complete genomeputative excisionase2e-1684.7
NC_009801:1756610:177714917771491777400252Escherichia coli E24377A, complete genomeputative phage excisionase protein2e-1684
NC_009832:2460027:246582924658292466107279Serratia proteamaculans 568, complete genomeprotein of unknown function DUF1233 excisionase putative3e-1684
NC_016902:2305659:230818123081812308417237Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-1582
CP002516:2305659:230818123081812308417237Escherichia coli KO11, complete genomeprotein of unknown function DUF1233 excisionase1e-1582