Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1835924 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1835924, End: 1836163, Length: 240

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:2812905:282887928288792829118240Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-31134
NC_011080:2761403:277737727773772777616240Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein2e-31134
NC_009648:1541699:154419915441991544459261Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-1993.2
NC_013850:2182337:218594221859422186181240Klebsiella variicola At-22 chromosome, complete genomehypothetical protein4e-1890.1
NC_011283:2836000:290707629070762907429354Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-1786.7
NC_014121:1682638:168240916824091682651243Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1065.1