Pre_GI: BLASTP Hits

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Query: NC_010067:2529750:2589984 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2589984, End: 2590346, Length: 363

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:3627588:367423436742343674599366Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeantitermination protein N2e-46184
NC_002655:1332961:133989313398931340276384Escherichia coli O157:H7 EDL933, complete genomeputative antitermination protein N of bacteriophage BP-933W2e-41167
AP010958:5361207:537388453738845374267384Escherichia coli O103:H2 str. 12009 DNA, complete genomeprobable early gene regulator N2e-41167
NC_011353:3276734:328517132851713285554384Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantitermination protein N2e-41167
NC_011601:2614691:262163626216362622019384Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeearly gene regulator2e-41167
NC_013008:3231414:324004232400423240425384Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantitermination protein N of bacteriophage BP-933W2e-41167
NC_013353:5361207:537388453738845374267384Escherichia coli O103:H2 str. 12009, complete genomeearly gene regulator N2e-41167
NC_013361:1558423:156808715680871568470384Escherichia coli O26:H11 str. 11368 chromosome, complete genomeearly gene regulator N2e-41167
NC_013364:1183000:119115011911501191533384Escherichia coli O111:H- str. 11128, complete genomeputative early gene regulator N2e-41167
NC_016612:4119410:412603241260324126394363Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-31132