Pre_GI: BLASTP Hits

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Query: NC_010067:2529750:2571958 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2571958, End: 2573253, Length: 1296

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:2072173:2092362209236220936571296Escherichia fergusonii ATCC 35469, complete genomeCoat protein (Protein gp5)0663
NC_020418:3102460:3121460312146031227431284Morganella morganii subsp. morganii KT, complete genomehypothetical protein6e-164577
NC_007946:2593500:2613745261374526149981254Escherichia coli UTI89, complete genomehypothetical protein3e-31136
NC_012125:1360593:1360593136059313618461254Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-31136
NC_011742:2489000:2510068251006825113211254Escherichia coli S88 chromosome, complete genomeCoat protein from phage6e-31135
NC_008563:2565876:2586971258697125882241254Escherichia coli APEC O1, complete genomehypothetical protein6e-31135
NC_013364:2612822:2632609263260926338621254Escherichia coli O111:H- str. 11128, complete genomeputative capsid protein1e-29131