Pre_GI: BLASTP Hits

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Query: NC_010001:851671:864876 Clostridium phytofermentans ISDg, complete genome

Start: 864876, End: 866546, Length: 1671

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013406:5066769:5112003511200351135981596Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-59229
NC_013406:3583474:3586825358682535884531629Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-59229
NC_014652:163347:1770881770881787071620Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 12e-47191
NC_015690:4361000:4447186444718644488201635Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-47190
NC_016935:4117485:4213319421331942149531635Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-47189
NC_014392:1935130:1937088193708819386831596Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 11e-45184
NC_014657:1775929:1792442179244217940371596Caldicellulosiruptor owensensis OL chromosome, complete genomeextracellular solute-binding protein family 11e-45184
NC_014720:154111:1804561804561820361581Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 14e-39163
NC_016935:2460795:2487578248757824891941617Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-22107
NC_015690:1929599:1956367195636719579831617Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-22107
NC_013406:5066769:5070236507023650718521617Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-21102
NC_004193:3325612:3341057334105733426911635Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-20101
NC_003305:1:1636016360179281569Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein [sugar]3e-1790.5
NC_009617:4436837:4459569445956944611851617Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular solute-binding protein2e-1687.8
NC_016935:1306472:1327748132774813293731626Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1482
NC_015690:3883243:3902653390265339042781626Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1480.9
NC_015588:2281354:2289171228917122907871617Isoptericola variabilis 225 chromosome, complete genomeextracellular solute-binding protein family 13e-1377.4
NC_010001:615427:6154276154276171031677Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 17e-1375.9
NC_014652:1651671:1655312165531216569461635Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 17e-1375.9
NC_016641:3711972:3726839372683937284461608Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1170.9
NC_016935:2256000:2265714226571422672191506Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1068.2
NC_015690:1726000:1735520173552017370251506Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1068.2
NC_016935:2347691:2388363238836323900211659Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-1066.6
NC_015690:1818333:1858491185849118601491659Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-1066.6
NC_016641:3711972:3715558371555837172491692Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein6e-1066.2
CP002207:227118:2408102408102423331524Bacillus atrophaeus 1942, complete genomelipoprotein2e-0964.7
NC_014639:227118:2408102408102423331524Bacillus atrophaeus 1942 chromosome, complete genomelipoprotein2e-0964.7
NC_013406:3583474:3619295361929536208961602Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0963.2
NC_013174:2564979:2566618256661825682791662Jonesia denitrificans DSM 20603, complete genomeextracellular solute-binding protein family 18e-0962.4
UCMB5137:303641:3193183193183208411524Bacillus atrophaeus UCMB-5137lipoprotein1e-0861.6
NC_016935:2347691:2357210235721023587601551Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0861.6
NC_015690:1818333:1827340182734018288901551Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0861.6
NC_015690:4469775:4508042450804245096971656Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0861.2
NC_016935:4233223:4262426426242642640811656Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0861.2
NC_016047:876875:8925298925298940371509Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completelipoprotein LplA2e-0860.8
NC_014479:736102:7497697497697513101542Bacillus subtilis subsp. spizizenii str. W23 chromosome, completelipoprotein2e-0860.8
NC_015690:5263108:5277813527781352793961584Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0860.1
NC_016935:5017317:5032020503202050336031584Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0860.1
NC_014976:2981777:2997425299742529989331509Bacillus subtilis BSn5 chromosome, complete genomelipoprotein1e-0758.5
NC_000964:764118:7788667788667803741509Bacillus subtilis subsp. subtilis str. 168, complete genomelipoprotein1e-0758.5
NC_019896:3281193:3283105328310532846131509Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeLipoprotein LplA1e-0758.5
NC_017195:742298:7570477570477585551509Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completelipoprotein LplA3e-0757.4
NC_016935:4813916:4816911481691148185811671Paenibacillus mucilaginosus 3016 chromosome, complete genomepolysaccharide ABC transporter substrate-binding protein3e-0757.4
NC_014410:989698:9937249937249953971674Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 14e-0757
NC_010001:986500:1001005100100510025761572Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 14e-0756.6
NC_016935:1365463:1367350136735013690141665Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein1e-0655.1
NC_019897:1224798:1264380126438012660081629Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-0654.3
NC_015690:3941113:3942182394218239438461665Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein2e-0654.3
NC_015588:475723:4863304863304879821653Isoptericola variabilis 225 chromosome, complete genomeextracellular solute-binding protein family 13e-0654.3
NC_016935:4117485:4162465416246541641531689Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0653.5