Pre_GI: BLASTP Hits

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Query: NC_010001:4486170:4510144 Clostridium phytofermentans ISDg, complete genome

Start: 4510144, End: 4510467, Length: 324

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009655:1626466:163463216346321634955324Actinobacillus succinogenes 130Z chromosome, complete genomecupin3e-27120
NC_004460:973738:985999985999986319321Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein1e-26118
NC_015510:5539153:555505255550525555405354Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeCupin 2 barrel domain-containing protein6e-24109
NC_016612:361417:375357375357375683327Klebsiella oxytoca KCTC 1686 chromosome, complete genomecupin2e-22104
NC_012880:2399205:240968824096882410020333Dickeya dadantii Ech703, complete genomeCupin 2 conserved barrel domain protein1e-1892
NC_017243:349144:362937362937363266330Brachyspira intermedia PWS/A chromosome, complete genomecupin 2 barrel domain-containing protein1e-1891.7
NC_014150:1902241:191413519141351914461327Brachyspira murdochii DSM 12563 chromosome, complete genomeCupin 2 conserved barrel domain protein4e-1683.6
NC_014537:663216:666503666503666850348Vulcanisaeta distributa DSM 14429 chromosome, complete genomeCupin 2 conserved barrel domain-containing protein5e-1373.2
NC_010175:1825878:183162118316211831962342Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein3e-1063.9
NC_012032:1827244:183300518330051833328324Chloroflexus sp. Y-400-fl, complete genomeCupin 2 conserved barrel domain protein3e-1063.9
NC_014973:4503054:450814445081444508461318Geobacter sp. M18 chromosome, complete genomeCupin 2 barrel domain-containing protein5e-0960.1
NC_015312:6357469:636604063660406366459420Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeCupin 2 barrel domain-containing protein1e-0755.5
NC_008701:1259000:126471312647131265021309Pyrobaculum islandicum DSM 4184, complete genomeCupin 2, conserved barrel domain protein3e-0753.9
NC_018876:2403892:242962624296262429892267Methanolobus psychrophilus R15 chromosome, complete genomecupin 2 domain-containing protein8e-0649.3