Pre_GI: BLASTP Hits

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Query: NC_009838:81913:86038 Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence

Start: 86038, End: 86334, Length: 297

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. Avian pathogenic Escherichia coli strain isolated from the lung of a chicken clinically diagnosed with colisepticemia. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CU928145:3983432:399268139926813993010330Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator6e-30129
NC_011748:3983432:399268139926813993010330Escherichia coli 55989, complete genomeputative transcriptional regulator6e-30129
NC_013716:3512950:354975935497593550055297Citrobacter rodentium ICC168, complete genomeputative transcriptional regulator7e-30129
NC_009838:81913:117517117517117816300Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceputative transcriptional regulator1e-29128
NC_011149:4677412:469231746923174692622306Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transcriptionl regulator HipB3e-29127
NC_007953:1434705:143943014394301439951522Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, XRE family2e-1994
NC_015138:5046921:505157250515725051982411Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehelix-turn-helix domain-containing protein3e-0960.5
NC_014414:2540189:2550056255005625515161461Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein2e-0651.2
NC_007794:3218729:322968332296833230366684Novosphingobium aromaticivorans DSM 12444, complete genomeputative prophage repressor4e-0650.1