Pre_GI: BLASTP Hits

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Query: NC_009831:4539952:4572832 Shewanella sediminis HAW-EB3, complete genome

Start: 4572832, End: 4573485, Length: 654

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006371:1411335:141591614159161416563648Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein1e-53209
NC_009901:3317068:333673233367323337397666Shewanella pealeana ATCC 700345, complete genomeGlutathione S-transferase domain1e-43176
NC_015733:1793399:179280917928091793408600Pseudomonas putida S16 chromosome, complete genomeglutathione S-transferase domain-containing protein3e-36151
NC_016830:4295831:429649342964934297095603Pseudomonas fluorescens F113 chromosome, complete genomeglutathione S-transferase5e-36150
NC_007298:1499344:151425515142551514893639Dechloromonas aromatica RCB, complete genomeGlutathione S-transferase, N-terminal4e-30130