Pre_GI: BLASTP Hits

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Query: NC_009831:4539952:4567794 Shewanella sediminis HAW-EB3, complete genome

Start: 4567794, End: 4569512, Length: 1719

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011979:2969969:2981278298127829827951518Geobacter sp. FRC-32, complete genomehypothetical protein5e-56219
NC_012522:5895946:5920721592072159226401920Rhodococcus opacus B4, complete genomehypothetical protein1e-1585.5
NC_014666:4118000:4124757412475741268292073Frankia sp. EuI1c chromosome, complete genomeDNA/RNA non-specific endonuclease1e-1068.6
NC_013720:5769910:5819811581981158220422232Pirellula staleyi DSM 6068, complete genomeEndonuclease I1e-0965.1
NC_016609:4233701:425100242510024251163162Niastella koreensis GR20-10 chromosome, complete genome4e-0757