Pre_GI: BLASTP Hits

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Query: NC_009831:3612206:3630106 Shewanella sediminis HAW-EB3, complete genome

Start: 3630106, End: 3631671, Length: 1566

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:4360577:4372602437260243740651464Methylobacterium nodulans ORS 2060, complete genomeCapsular polysaccharide biosynthesis protein-like protein5e-0859.7
NC_019962:960831:9720349720349732541221Natrinema pellirubrum DSM 15624, complete genomehypothetical protein1e-0758.5
NC_017065:274165:290478290478291155678Rickettsia slovaca str. D-CWPP chromosome, complete genomecapsular polysaccharide biosynthesis protein1e-0655.1
NC_016639:274157:290470290470291147678Rickettsia slovaca 13-B chromosome, complete genomecapsular polysaccharide biosynthesis protein1e-0655.1
NC_014100:449541:4519944519944532501257Caulobacter segnis ATCC 21756 chromosome, complete genomecapsular polysaccharide biosynthesis protein2e-0654.3
NC_013422:1604157:1616218161621816181101893Halothiobacillus neapolitanus c2, complete genomeCapsular polysaccharide biosynthesis protein-like protein3e-0653.9