Pre_GI: BLASTP Hits

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Query: NC_009802:647901:653976 Campylobacter concisus 13826, complete genome

Start: 653976, End: 654611, Length: 636

Host Lineage: Campylobacter concisus; Campylobacter; Campylobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: Campylobacter concisus 13826 is a gastrointestinal clinical isolate. Members of this genus are one of the most common causes of bacterial gastroenteritis (campylobacteriosis). Usually the symptoms are abdominal pain, fever, diarrhea, and cramps, but the illness can sometimes be fatal and some infected individuals develop a syndrome (Guillain-Barre) in which the nerves connecting the spinal cord to the brain are damaged. C. jejuni is the main cause of campylobacteriosis, but other species can also cause infection, including C. coli, C. upsaliensis, and C. concisus. Campylobacter concisus was first isolated from the human oral cavity in cases of gingivitis; however the role it plays in periodontal disease is unclear. This organism has also been isolated from children and immunocompromised patients with gastrointestinal disease. C. concisus is a genetically diverse species, comprised of at least four genomospecies.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017192:1745114:175935217593521759951600Arcobacter sp. L, complete genometwo-component response regulator3e-1375.1
NC_018000:3371829:337320133732013373881681Sinorhizobium fredii USDA 257 chromosome, complete genometwo-component system response regulator2e-0859.7
NC_013889:1382705:140090114009011401515615Thioalkalivibrio sp. K90mix chromosome, complete genometranscriptional regulator, LuxR family3e-0858.5
NC_019902:97987:979879798798592606Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative LuxR-family transcriptional regulator1e-0757
NC_016815:1085462:110319811031981103878681Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceTranscriptional regulatory protein degU4e-0754.7
NC_016609:7565483:756548375654837566118636Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, LuxR family5e-0651.2
NC_004461:2002000:200398020039802004636657Staphylococcus epidermidis ATCC 12228, complete genomeresponse regulators of two-component regulatory5e-0651.2