Pre_GI: BLASTP Hits

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Query: NC_009800:2156091:2179302 Escherichia coli HS, complete genome

Start: 2179302, End: 2179538, Length: 237

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013850:1658010:166389716638971664526630Klebsiella variicola At-22 chromosome, complete genomephosphoesterase PA-phosphatase related protein2e-22103
NC_011283:1690193:169608816960881696717630Klebsiella pneumoniae 342 chromosome, complete genomePAP2 family protein2e-2097.8
NC_020181:360500:368525368525369154630Enterobacter aerogenes EA1509E, complete genomeProbable transmembrane protein6e-1372.8
NC_015663:4950000:500503750050375005666630Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative acid phosphatase2e-1271.2
NC_021066:460292:466506466506467135630Raoultella ornithinolytica B6, complete genomeputative acid phosphatase6e-1269.3