Pre_GI: BLASTP Hits

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Query: NC_009708:915814:916473 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 916473, End: 917093, Length: 621

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:443398:459019459019459588570Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-75281
NC_016816:1137904:115276811527681153337570Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-75281
NC_011274:311843:315593315593316159567Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-75279
NC_011415:308825:323498323498324070573Escherichia coli SE11 chromosome, complete genomehypothetical protein7e-72270
NC_013421:1505176:150517615051761505745570Pectobacterium wasabiae WPP163, complete genomehypothetical protein7e-1993.6
NC_012917:3241196:326455232645523265121570Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein7e-1890.5