Pre_GI: BLASTP Hits

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Query: NC_009708:2788855:2816697 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2816697, End: 2817518, Length: 822

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:2820500:285198128519812852763783Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein3e-125447
NC_010465:2820500:285390228539022854720819Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-73276
NC_016612:4823529:483731948373194838140822Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-47188
NC_016612:4823529:482915848291584829958801Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-47187
NC_016612:4823529:483082648308264831626801Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-45182
NC_016612:4823529:483166048316604832466807Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-45182
NC_016612:4823529:482830648283064829124819Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-45181
NC_016612:4823529:483816448381644838904741Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein8e-45180
NC_016612:4823529:483646248364624837214753Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-44179
NC_016612:4823529:482999248299924830792801Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-44177
NC_016612:4823529:483566348356634836370708Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-42172
NC_014323:816027:829254829254830219966Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein9e-1890.9
NC_014323:816027:8270718270718280721002Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-1790.1
NC_014323:816027:8280868280868291051020Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein4e-1788.6
NC_016845:4539381:455170745517074552582876Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-1582.4
NC_010465:2820500:285358528535852853857273Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein5e-1581.6
NC_014323:816027:826067826067826816750Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein6e-1374.7