Pre_GI: BLASTP Hits

Some Help

Query: NC_009708:1497898:1504331 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1504331, End: 1505038, Length: 708

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:3237990:325012232501223250829708Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-136483
NC_010634:3155741:316787331678733168580708Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-136483
NC_014973:2425994:242833524283352429036702Geobacter sp. M18 chromosome, complete genomehypothetical protein5e-39160
NC_015554:1215401:121821812182181218919702Alteromonas sp. SN2 chromosome, complete genomehypothetical protein1e-33142
NC_010688:3740399:375332737533273754013687Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-32140
NC_003902:1220600:122605812260581226750693Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein4e-32138
NC_007086:3805390:381901638190163819702687Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-31135
NC_016010:1247008:125243512524351253121687Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein3e-30132
NC_012483:3731542:374285737428573743537681Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein3e-29128
NC_015677:3787419:379681637968163797505690Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-27122
NC_007508:1324000:132739113273911327966576Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein9e-27120
NC_013730:5877879:589913758991375899829693Spirosoma linguale DSM 74, complete genomehypothetical protein2e-25115
NC_017271:1289278:129171012917101292276567Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein1e-24113
NC_013222:1536203:154705215470521547753702Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-1892.8