Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:63230:81290 Kineococcus radiotolerans SRS30216, complete genome

Start: 81290, End: 82072, Length: 783

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013729:5982000:598385959838595984584726Kribbella flavida DSM 17836, complete genomeMethyltransferase type 115e-57221
NC_010622:2385932:239133123913312392071741Burkholderia phymatum STM815 chromosome 1, complete sequenceMethyltransferase type 112e-33143
NC_012721:137046:142619142619143368750Burkholderia glumae BGR1 chromosome 2, complete genomeSAM-dependent methyltransferase5e-28124
NC_014643:195948:202124202124202654531Rothia dentocariosa ATCC 17931 chromosome, complete genometype 12 methyltransferase2e-1272.8
NC_007759:2146254:215537421553742156369996Syntrophus aciditrophicus SB, complete genomemethyltransferase1e-0757
NC_009901:2485965:250207425020742502784711Shewanella pealeana ATCC 700345, complete genomeubiquinone biosynthesis O-methyltransferase6e-0754.7
NC_014210:1625954:163627816362781637036759Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Methyltransferase type 116e-0754.7
NC_008781:2925818:293162429316242932340717Polaromonas naphthalenivorans CJ2, complete genomeubiquinone biosynthesis O-methyltransferase8e-0754.3
NC_009654:3215205:324053332405333241255723Marinomonas sp. MWYL1, complete genomeubiquinone biosynthesis O-methyltransferase9e-0754.3
NC_013959:2892660:289377728937772894763987Sideroxydans lithotrophicus ES-1 chromosome, complete genomeMethyltransferase type 112e-0653.5
NC_014210:2372813:240263724026372403071435Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-0652
NC_015588:2281354:230177723017772302526750Isoptericola variabilis 225 chromosome, complete genomeMethyltransferase type 126e-0651.6
NC_016887:1949927:196165319616531962351699Nocardia cyriacigeorgica GUH-2, complete genomeputative methyltransferase6e-0651.2