Pre_GI: BLASTP Hits

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Query: NC_009664:570768:594488 Kineococcus radiotolerans SRS30216, complete genome

Start: 594488, End: 596905, Length: 2418

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008536:7834632:7854773785477378577182946Solibacter usitatus Ellin6076, complete genomeNHL repeat containing protein4e-1377.4
NC_008278:5053899:5060993506099350631852193Frankia alni ACN14a, complete genomePutative eukaryotic-type serine/threonine protein kinase1e-1172.8
NC_017093:7255652:727394672739467274944999Actinoplanes missouriensis 431, complete genomehypothetical protein6e-1066.6
NC_016584:1436710:1446961144696114515414581Desulfosporosinus orientis DSM 765 chromosome, complete genomegluconolactonase2e-0965.5
NC_010571:637398:6713916713916747833393Opitutus terrae PB90-1, complete genomeImmunoglobulin I-set domain protein2e-0965.1
NC_018515:1406816:1414764141476414208416078Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein8e-0963.2
NC_009921:8648994:8652873865287386550712199Frankia sp. EAN1pec, complete genomeserine/threonine protein kinase2e-0861.6
NC_002936:1319266:1326822132682213323265505Dehalococcoides ethenogenes 195, complete genomeNHL/RHS/YD repeat protein5e-0860.5
NC_008255:1344674:1348711134871113504771767Cytophaga hutchinsonii ATCC 33406, complete genomehypothetical protein8e-0860.1
NC_010162:2717741:2724384272438427311576774Sorangium cellulosum 'So ce 56', complete genomehypothetical protein4e-0654.3
NC_009943:970901:9753169753169838118496Candidatus Desulfococcus oleovorans Hxd3, complete genomeYD repeat protein5e-0653.9
NC_003552:2502689:2510146251014625111711026Methanosarcina acetivorans C2A, complete genomehypothetical protein5e-0653.5
NC_013665:918313:9298299298299329693141Methanocella paludicola SANAE, complete genomehypothetical protein6e-0653.5