Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4677841 Kineococcus radiotolerans SRS30216, complete genome

Start: 4677841, End: 4678629, Length: 789

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009953:3611177:364065636406563641444789Salinispora arenicola CNS-205 chromosome, complete genomealpha/beta hydrolase fold protein4e-27122
NC_016109:8664974:869933886993388700123786Kitasatospora setae KM-6054, complete genomeputative hydrolase6e-1581.3
NC_016109:62000:831568315683941786Kitasatospora setae KM-6054, complete genomeputative hydrolase6e-1581.3
NC_021184:1024305:104048410404841041275792Desulfotomaculum gibsoniae DSM 7213, complete genomeputative hydrolase or acyltransferase of alpha/beta superfamily4e-0755.5
NC_021184:3259908:325990832599083260702795Desulfotomaculum gibsoniae DSM 7213, complete genomeputative hydrolase or acyltransferase of alpha/beta superfamily8e-0754.3
NC_015556:1188500:120603712060371206879843Pseudomonas fulva 12-X chromosome, complete genomealpha/beta hydrolase fold protein2e-0653.5
NC_013665:849508:901180901180901995816Methanocella paludicola SANAE, complete genomehypothetical protein2e-0653.1
NC_008314:1202963:121068612106861211480795Ralstonia eutropha H16 chromosome 2, complete sequencepredicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily)3e-0652.8