Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4640732 Kineococcus radiotolerans SRS30216, complete genome

Start: 4640732, End: 4641013, Length: 282

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:8114376:812097181209718121552582Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1063.2
NC_018524:301992:320780320780321280501Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomedinB superfamily protein6e-0856.2
NC_018681:5551000:556253655625365563042507Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein2e-0754.3
NC_014815:3790050:380962738096273810148522Micromonospora sp. L5 chromosome, complete genomehypothetical protein5e-0753.1
NC_021177:2309615:230961523096152310118504Streptomyces fulvissimus DSM 40593, complete genomeMini-circle protein2e-0651.2