Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4583816 Kineococcus radiotolerans SRS30216, complete genome

Start: 4583816, End: 4584706, Length: 891

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014639:1358597:140046314004631401314852Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein3e-28125
CP002207:1358597:140046314004631401314852Bacillus atrophaeus 1942, complete genomehypothetical protein3e-28125
NC_017195:1852935:189352118935211894327807Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYndG6e-28124
NC_020410:1856376:185637618563761857191816Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized membrane protein yndG5e-26118
NC_019842:1919866:191905419190541919869816Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein5e-26118