Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4578221 Kineococcus radiotolerans SRS30216, complete genome

Start: 4578221, End: 4579000, Length: 780

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013757:1499643:151650315165031517309807Geodermatophilus obscurus DSM 43160, complete genomeANTAR domain protein with unknown sensor2e-36152
NC_017955:343931:360464360464361204741Modestobacter marinus, complete genomeResponse regulator with antiterminator output domain9e-30130
NC_017955:343931:359475359475360203729Modestobacter marinus, complete genomehypothetical protein5e-21101
NC_014659:2769486:277002927700292770760732Rhodococcus equi 103S, complete genomeRNA binding sensor regulator1e-1997.1
NC_013729:6217500:623497362349736235746774Kribbella flavida DSM 17836, complete genomeANTAR domain protein with unknown sensor1e-1997.1
NC_016943:4692561:470596547059654706708744Blastococcus saxobsidens DD2, complete genomeputative Response regulator with antiterminator output domain4e-1995.5
NC_009664:4423829:454938145493814550289909Kineococcus radiotolerans SRS30216, complete genomeresponse regulator receiver and ANTAR domain protein6e-1994.7
NC_017955:3670670:368933036893303690058729Modestobacter marinus, complete genometwo-component response regulator receiver and ANTAR, GAF and CheY domains1e-1584
NC_018681:3541484:357224035722403572980741Nocardia brasiliensis ATCC 700358 chromosome, complete genomeANTAR domain-containing protein1e-1584
NC_009142:3943829:396423339642333964937705Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein4e-1478.6
NC_016948:1074034:108763610876361088331696Mycobacterium intracellulare MOTT-64 chromosome, complete genomeantar domain protein6e-1478.2
NC_016948:1074034:108571310857131086477765Mycobacterium intracellulare MOTT-64 chromosome, complete genomeresponse regulator receiver/ANTAR domain-containing protein6e-0754.7
NC_013729:2133294:214949121494912150195705Kribbella flavida DSM 17836, complete genomeANTAR domain protein with unknown sensor2e-0653.1