Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4565805 Kineococcus radiotolerans SRS30216, complete genome

Start: 4565805, End: 4566173, Length: 369

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013521:107937:120921120921121286366Sanguibacter keddieii DSM 10542, complete genomehypothetical protein2e-37153
NC_017955:1506221:152428615242861524954669Modestobacter marinus, complete genomehypothetical protein1e-1994.7
NC_013716:4306695:437581443758144376176363Citrobacter rodentium ICC168, complete genomehypothetical protein1e-1788.2
NC_013716:4306695:437622543762254376587363Citrobacter rodentium ICC168, complete genomehypothetical protein6e-1785.9
NC_018524:1279156:129506212950621295433372Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein1e-1582
NC_009925:1184442:119187311918731192283411Acaryochloris marina MBIC11017, complete genomehypothetical protein1e-0755.1