Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4549381 Kineococcus radiotolerans SRS30216, complete genome

Start: 4549381, End: 4550289, Length: 909

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017955:3670670:368933036893303690058729Modestobacter marinus, complete genometwo-component response regulator receiver and ANTAR, GAF and CheY domains3e-40166
NC_016948:1074034:108763610876361088331696Mycobacterium intracellulare MOTT-64 chromosome, complete genomeantar domain protein3e-27122
NC_009142:3943829:396423339642333964937705Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-24113
NC_013757:1499643:151650315165031517309807Geodermatophilus obscurus DSM 43160, complete genomeANTAR domain protein with unknown sensor2e-1996.3
NC_013729:2133294:214949121494912150195705Kribbella flavida DSM 17836, complete genomeANTAR domain protein with unknown sensor5e-1891.7
NC_009664:4423829:457822145782214579000780Kineococcus radiotolerans SRS30216, complete genomeputative GAF sensor protein2e-1583.2
NC_017955:343931:360464360464361204741Modestobacter marinus, complete genomeResponse regulator with antiterminator output domain1e-1480.9
NC_016943:4692561:470596547059654706708744Blastococcus saxobsidens DD2, complete genomeputative Response regulator with antiterminator output domain6e-1478.6
NC_014659:2769486:277002927700292770760732Rhodococcus equi 103S, complete genomeRNA binding sensor regulator5e-1478.6
NC_017955:343931:359475359475360203729Modestobacter marinus, complete genomehypothetical protein9e-1374.3
NC_008713:259791:261955261955262698744Arthrobacter aurescens TC1 plasmid TC2, complete sequenceANTAR domain protein1e-0963.9
NC_018681:3541484:357224035722403572980741Nocardia brasiliensis ATCC 700358 chromosome, complete genomeANTAR domain-containing protein1e-0861.2
NC_016948:1074034:108571310857131086477765Mycobacterium intracellulare MOTT-64 chromosome, complete genomeresponse regulator receiver/ANTAR domain-containing protein1e-0860.8
NC_016948:2931285:293128529312852932031747Mycobacterium intracellulare MOTT-64 chromosome, complete genomesensor histidine kinase4e-0858.9
NC_016948:1074034:108653810865381087326789Mycobacterium intracellulare MOTT-64 chromosome, complete genomeANTAR domain-containing protein5e-0755.5
NC_006361:4521820:454361345436134544401789Nocardia farcinica IFM 10152, complete genomeputative transcription antitermination regulator1e-0654.3