Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4536262 Kineococcus radiotolerans SRS30216, complete genome

Start: 4536262, End: 4537641, Length: 1380

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:4390417:4411572441157244130051434Pseudomonas denitrificans ATCC 13867, complete genomeamine oxidase6e-47188
NC_008313:886248:9086339086339101261494Ralstonia eutropha H16 chromosome 1, complete sequencemonoamine oxidase (Flavin containing)4e-46186
NC_021064:2001786:2005920200592020072661347Propionibacterium avidum 44067, complete genomeputative flavin-containing amine oxidase4e-45182
NC_020829:4390417:4415280441528044167791500Pseudomonas denitrificans ATCC 13867, complete genometwin-arginine translocation pathway signal protein2e-42174
NC_009664:1434974:1450524145052414519151392Kineococcus radiotolerans SRS30216, complete genomePutrescine oxidase1e-31137
NC_010397:4387500:4399332439933244007561425Mycobacterium abscessus chromosome Chromosome, complete sequencePossible putrescine oxidase4e-29129
NC_010617:92000:9205892058935151458Kocuria rhizophila DC2201, complete genomeputrescine oxidase2e-25117
NC_012803:1094679:1111211111121111127431533Micrococcus luteus NCTC 2665, complete genomemonoamine oxidase2e-20100
NC_008095:6143738:6165783616578361671921410Myxococcus xanthus DK 1622, complete genomeamine oxidase, flavin-containing1e-1481.3
NC_012673:2064298:2089060208906020900911032Exiguobacterium sp. AT1b, complete genomeamine oxidase1e-1067.8
NC_012855:39751:5419354193555931401Ralstonia pickettii 12D plasmid pRp12D01, complete sequenceamine oxidase2e-1067.4
NC_010338:4148667:4157917415791741590201104Caulobacter sp. K31, complete genomeamine oxidase1e-0965.1
NC_009142:5425763:5426810542681054279101101Saccharopolyspora erythraea NRRL 2338, complete genomeamine oxidase, flavin-containing4e-0653.1