Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4521778 Kineococcus radiotolerans SRS30216, complete genome

Start: 4521778, End: 4522503, Length: 726

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014306:2518996:253461925346192535287669Erwinia billingiae Eb661, complete genomePutative Asp/Glu/hydantoin racemase7e-1374.3
NC_015138:3022414:304381330438133044457645Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAsp/Glu/hydantoin racemase1e-0963.5
NC_015152:2887414:289555928955592896221663Spirochaeta sp. Buddy chromosome, complete genomeAsp/Glu/hydantoin racemase3e-0755.8
NC_010625:1465603:147172714717271472386660Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceAsp/Glu/hydantoin racemase5e-0754.7