Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4514085 Kineococcus radiotolerans SRS30216, complete genome

Start: 4514085, End: 4514396, Length: 312

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:444535544453554446227873Kineococcus radiotolerans SRS30216, complete genomeplasmid encoded RepA protein3e-36150
NC_009664:4423829:464841046484104649252843Kineococcus radiotolerans SRS30216, complete genomeplasmid encoded RepA protein3e-36150
NC_006350:3865584:388632238863223887254933Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid replication protein1e-0962
NC_008702:2230396:223914422391442239623480Azoarcus sp. BH72, complete genomeprotein kinase5e-0856.6
NC_015259:624979:637728637728638627900Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative RepA replicase protein6e-0752.8
NC_007507:101887:1084411084411096671227Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative replication protein A1e-0652.4
NC_008752:415599:421826421826422725900Acidovorax avenae subsp. citrulli AAC00-1, complete genomeplasmid encoded RepA protein1e-0652
NC_007973:3065632:307223730722373073226990Ralstonia metallidurans CH34 chromosome 1, complete sequenceplasmid encoded RepA protein7e-0649.3