Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4495488 Kineococcus radiotolerans SRS30216, complete genome

Start: 4495488, End: 4496201, Length: 714

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016114:1:149401494015647708Streptomyces flavogriseus ATCC 33331 chromosome, complete genomerestriction endonuclease1e-1376.6
NC_010572:8352462:836379183637918364453663Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-1170.1
NC_012491:3704000:371332737133273714043717Brevibacillus brevis NBRC 100599, complete genomehypothetical protein2e-0962.8
NC_013748:24498:3187931879329281050Haloterrigena turkmenica DSM 5511 plasmid pHTUR05, completerestriction endonuclease9e-0960.5
NC_018750:6588206:661199766119976612596600Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0860.5
NC_020911:1776670:1785482178548217865731092Octadecabacter antarcticus 307, complete genomehypothetical protein3e-0755.8
NC_013757:1544348:155724815572481558171924Geodermatophilus obscurus DSM 43160, complete genomerestriction endonuclease4e-0652