Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4441198 Kineococcus radiotolerans SRS30216, complete genome

Start: 4441198, End: 4442745, Length: 1548

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015416:2723189:2733042273304227341901149Methanosaeta concilii GP-6 chromosome, complete genomeSer/Thr protein phosphatase family protein2e-20100
NC_014762:1204584:1220780122078012219101131Sulfuricurvum kujiense DSM 16994 chromosome, complete genomemetallophosphoesterase3e-1997.1
NC_009663:738846:7422337422337433541122Sulfurovum sp. NBC37-1, complete genomeDNA double-strand break repair protein6e-1789.4
NC_017187:1580988:1583344158334415844621119Arcobacter butzleri ED-1, complete genomemetallophosphoesterase5e-1582.8
NC_017187:1564403:1583344158334415844621119Arcobacter butzleri ED-1, complete genomemetallophosphoesterase5e-1582.8
NC_014314:755166:7551667551667564041239Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completenuclease SbcCD subunit D3e-0963.5
NC_007514:1475323:1478952147895214802561305Chlorobium chlorochromatii CaD3, complete genomeputative exonuclease4e-0756.6
NC_015931:1443447:1451754145175414529081155Pyrolobus fumarii 1A, complete genomemetallophosphoesterase4e-0756.6