Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4438834 Kineococcus radiotolerans SRS30216, complete genome

Start: 4438834, End: 4440936, Length: 2103

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010794:800951:8119728119728138341863Methylacidiphilum infernorum V4, complete genomeHerA helicase5e-58226
NC_015573:2463123:2495550249555024973731824Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeAAA ATPase3e-57223
NC_009454:136468:1538271538271555781752Pelotomaculum thermopropionicum SI, complete genomeATPase1e-51205
NC_005835:1345790:1354087135408713559221836Thermus thermophilus HB27, complete genomehypothetical protein6e-47189