Pre_GI: BLASTP Hits

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Query: NC_009664:4347718:4351256 Kineococcus radiotolerans SRS30216, complete genome

Start: 4351256, End: 4352536, Length: 1281

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:3607958:3620926362092636221731248Saccharothrix espanaensis DSM 44229 complete genomealpha/beta hydrolase fold containing protein3e-38159
NC_013929:2583849:2595462259546225968171356Streptomyces scabiei 87.22 chromosome, complete genomemembrane-anchored peptidase4e-35149
NC_013158:1620761:1628800162880016298011002Halorhabdus utahensis DSM 12940, complete genomeEsterase/lipase-like protein2e-1377
NC_013158:200424:2184912184912195131023Halorhabdus utahensis DSM 12940, complete genomelipase/esterase3e-1273.6
NC_015563:3203012:325440132544013255381981Delftia sp. Cs1-4 chromosome, complete genomeTriacylglycerol lipase4e-1066.2
NC_017219:1622050:162337516233751624310936Bifidobacterium longum subsp. infantis ATCC 15697, complete genomelipase/esterase8e-1065.5
NC_011593:1622260:162358516235851624520936Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein8e-1065.5
NC_017218:1042298:104611810461181047053936Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomepeptidase, S9A/B/C family, catalytic domain protein1e-0965.1
NC_015052:1094825:111261611126161113551936Bifidobacterium longum subsp. infantis 157F, complete genomelipase/esterase1e-0964.7
NC_013747:129394:1432631432631442761014Haloterrigena turkmenica DSM 5511 plasmid pHTUR04, completeEsterase/lipase-like protein2e-0964.3
NC_017221:1222963:122418012241801225115936Bifidobacterium longum subsp. longum KACC 91563 chromosome,lipase/esterase2e-0963.9
NC_010816:621849:624044624044624979936Bifidobacterium longum DJO10A, complete genomeEsterase/lipase2e-0963.9
NC_018524:444217:463704463704464429726Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeesterase family protein7e-0962
NC_015067:998500:101266010126601013595936Bifidobacterium longum subsp. longum JCM 1217, complete genomelipase/esterase8e-0962
NC_004307:579729:587917587917588852936Bifidobacterium longum NCC2705, complete genomehypothetical protein with similarity to lipase and esterase2e-0860.8
NC_016612:5231065:526889552688955269851957Klebsiella oxytoca KCTC 1686 chromosome, complete genomealpha/beta hydrolase fold domain protein2e-0860.8
NC_013730:4811911:483033848303384831315978Spirosoma linguale DSM 74, complete genomehypothetical protein3e-0860.1
NC_008601:753221:776065776065777051987Francisella tularensis subsp. novicida U112, complete genomehypothetical protein4e-0859.7
NC_013757:1888850:191003819100381910973936Geodermatophilus obscurus DSM 43160, complete genomeAlpha/beta hydrolase fold-3 domain protein4e-0859.7
NC_001263:132288:132288132288133178891Deinococcus radiodurans R1 chromosome 1, complete sequencelipase/esterase, putative2e-0757.8
NC_009848:2335265:233935023393502340219870Bacillus pumilus SAFR-032, complete genomepeptidase3e-0756.6
NC_021066:3028421:303962030396203040522903Raoultella ornithinolytica B6, complete genomeputative alpha/beta hydrolase6e-0755.8
NC_007777:3231649:3251707325170732527171011Frankia sp. CcI3, complete genomeAlpha/beta hydrolase fold-38e-0755.5
NC_008268:7180663:719891971989197199851933Rhodococcus sp. RHA1, complete genomepossible esterase1e-0654.7
NC_010474:19256:223222232223299978Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceesterase/lipase2e-0654.3
NC_014931:2511423:251321025132102514076867Variovorax paradoxus EPS chromosome, complete genomelipase2e-0654.3
NC_007511:3512100:352480635248063525771966Burkholderia sp. 383 chromosome 2, complete sequenceEsterase/lipase/thioesterase2e-0653.9
NC_015856:439795:4547684547684557871020Collimonas fungivorans Ter331 chromosome, complete genomelipase4e-0653.1