Pre_GI: BLASTP Hits

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Query: NC_009664:3969609:3975040 Kineococcus radiotolerans SRS30216, complete genome

Start: 3975040, End: 3976230, Length: 1191

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017955:4746441:4765553476555347674931941Modestobacter marinus, complete genomehypothetical protein6e-45181
NC_017955:693303:7158257158257178161992Modestobacter marinus, complete genomehypothetical protein1e-41171
NC_016789:2281180:2304981230498123068971917Corynebacterium diphtheriae PW8 chromosome, complete genometrehalose corynomycolyl transferase C4e-33142
NC_016783:2212341:2234864223486422367801917Corynebacterium diphtheriae INCA 402 chromosome, complete genometrehalose corynomycolyl transferase C3e-33142
NC_016785:2215732:2239713223971322416291917Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometrehalose corynomycolyl transferase C3e-33142
NC_016801:2271779:2294152229415222960681917Corynebacterium diphtheriae C7 (beta) chromosome, complete genometrehalose corynomycolyl transferase C3e-33142
NC_016790:2166000:2186581218658121884971917Corynebacterium diphtheriae VA01 chromosome, complete genometrehalose corynomycolyl transferase C3e-33142
NC_016800:2239626:2262506226250622644221917Corynebacterium diphtheriae BH8 chromosome, complete genometrehalose corynomycolyl transferase C3e-33142
NC_017955:3731480:3842891384289138479995109Modestobacter marinus, complete genomehypothetical protein6e-27122
NC_008271:119957:1286811286811306211941Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencehypothetical protein2e-25117
NC_010545:1691999:1703036170303617045531518Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein5e-23108
NC_016887:5607272:5616798561679856183631566Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein1e-22107
NC_015145:2693749:2697019269701926999372919Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomelysozyme M1 (1,4-beta-N-acetylmuramidase)1e-21104
NC_015859:1536439:1543942154394215458101869Corynebacterium variabile DSM 44702 chromosome, complete genometrehalose corynomycolyl transferase1e-21103
NC_006958:828089:8387858387858403681584Corynebacterium glutamicum ATCC 13032, complete genomePutative secreted protein2e-1894
NC_006958:1904582:1948539194853919501221584Corynebacterium glutamicum ATCC 13032, complete genomeputative secreted protein2e-1894
NC_003450:1903110:1947067194706719486501584Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein2e-1894
NC_012520:529000:5398305398305410231194Rhodococcus opacus B4 plasmid pROB01, complete sequencehypothetical protein3e-1893.2
NC_009342:589741:6094776094776110091533Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-1789.7
NC_012520:529000:5455615455615466101050Rhodococcus opacus B4 plasmid pROB01, complete sequencehypothetical protein2e-1687
NC_018681:5627940:5672172567217256741511980Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein3e-1686.7
NC_012520:529000:533747533747534331585Rhodococcus opacus B4 plasmid pROB01, complete sequencehypothetical protein6e-1375.9
NC_007947:2447635:245121524512152452117903Methylobacillus flagellatus KT, complete genomehypothetical protein6e-1375.5
NC_006361:4098469:4113480411348041145501071Nocardia farcinica IFM 10152, complete genomehypothetical protein8e-1375.1
NC_016943:4799915:4816378481637848174661089Blastococcus saxobsidens DD2, complete genomehypothetical protein2e-1170.5
NC_014168:2820315:283544028354402836063624Segniliparus rotundus DSM 44985 chromosome, complete genomeLGFP repeat protein3e-1066.6
NC_015683:241377:2486382486382499751338Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein4e-0962.8
NC_017317:246155:2533982533982547351338Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein4e-0962.8
NC_006958:1904582:1962583196258319644781896Corynebacterium glutamicum ATCC 13032, complete genomePutative secreted protein5e-0962.8
NC_003450:1903110:1961111196111119629671857Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein5e-0962.8
NC_016906:1458158:146272114627211463005285Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein1e-0758.2