Pre_GI: BLASTP Hits

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Query: NC_009664:3245210:3260465 Kineococcus radiotolerans SRS30216, complete genome

Start: 3260465, End: 3261373, Length: 909

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019974:2541880:255782225578222558796975Natronococcus occultus SP4, complete genomeglycosyl transferase3e-1065.9
NC_016902:1846492:185767018576701858530861Escherichia coli KO11FL chromosome, complete genomefamily 2 glycosyl transferase1e-0860.8
CP002516:1846492:185767018576701858530861Escherichia coli KO11, complete genomeglycosyl transferase family 21e-0860.8
CP002185:2233732:224732522473252248185861Escherichia coli W, complete genomeputative glycosyltransferase1e-0860.8
NC_008253:2134110:214707421470742147934861Escherichia coli 536, complete genomeputative glycosyltransferase1e-0860.8
NC_004431:2383901:239686623968662397735870Escherichia coli CFT073, complete genomeGlycosyl transferase1e-0860.8
NC_010994:3477000:348359334835933484555963Rhizobium etli CIAT 652, complete genomeputative beta-D-1,6 glucosyltransferase protein1e-0757.8
NC_015434:1313979:132206813220681323000933Verrucosispora maris AB-18-032 chromosome, complete genomeglycosyltransferase2e-0756.6
NC_013891:353625:3692133692133705201308Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeglycosyl transferase, family 2 protein7e-0754.7
NC_007503:919808:928042928042928728687Carboxydothermus hydrogenoformans Z-2901, complete genomeglycosyltransferase, group 2 family9e-0754.7
NC_000961:372000:3910673910673920711005Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-0653.9
NC_010581:561579:5724035724035734281026Beijerinckia indica subsp. indica ATCC 9039, complete genomeglycosyl transferase family 25e-0652
NC_019974:3816000:383095338309533831927975Natronococcus occultus SP4, complete genomeglycosyl transferase6e-0652