Pre_GI: BLASTP Hits

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Query: NC_009664:3245210:3245210 Kineococcus radiotolerans SRS30216, complete genome

Start: 3245210, End: 3246316, Length: 1107

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015636:966000:9913859913859925001116Methanothermococcus okinawensis IH1 chromosome, complete genomegroup 1 glycosyl transferase2e-1067
NC_014972:2371647:238561123856112386606996Desulfobulbus propionicus DSM 2032 chromosome, complete genomegroup 1 glycosyl transferase3e-1066.6
NC_009523:1025556:1051015105101510521271113Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase7e-1065.5
NC_009925:4044691:4070545407054540718371293Acaryochloris marina MBIC11017, complete genomeglycosyl transferase, group 1, putative1e-0964.7
NC_012791:821371:8342308342308364762247Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase group 12e-0963.9
NC_015680:755500:7743017743017754461146Pyrococcus yayanosii CH1 chromosome, complete genomeglycosyltransferase3e-0963.2
NC_013204:2826500:2861584286158428626391056Eggerthella lenta DSM 2243, complete genomeglycosyl transferase group 14e-0962.8
NC_013156:127000:1453191453191463681050Methanocaldococcus fervens AG86, complete genomeglycosyl transferase group 15e-0962.4
NC_016631:3114000:3152407315240731534141008Granulicella mallensis MP5ACTX8 chromosome, complete genomegroup 1 glycosyl transferase9e-0961.6
NC_014355:2775979:2786417278641727875681152Candidatus Nitrospira defluvii, complete genomeputative glycosyl transferase, group 19e-0961.6
NC_014972:544146:5501785501785513111134Desulfobulbus propionicus DSM 2032 chromosome, complete genomegroup 1 glycosyl transferase1e-0861.2
NC_012108:2874831:289323428932342894067834Desulfobacterium autotrophicum HRM2, complete genomeputative lipopolysaccharide N-acetyl-glycoaminyltransferase1e-0861.2
NC_009954:1520417:1520417152041715215081092Caldivirga maquilingensis IC-167, complete genomeglycosyl transferase group 12e-0860.8
NC_007759:2315490:232696223269622327960999Syntrophus aciditrophicus SB, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase2e-0860.5
NC_012804:816961:8368448368448383551512Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 13e-0859.7
NC_002939:2454686:2468454246845424695691116Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 1 family protein4e-0859.3
NC_010505:4820000:4834768483476848367862019Methylobacterium radiotolerans JCM 2831, complete genomeglycosyl transferase group 17e-0858.5
NC_000961:372000:3961213961213971311011Pyrococcus horikoshii OT3, complete genomehypothetical protein7e-0858.5
NC_007759:2315490:2328037232803723292841248Syntrophus aciditrophicus SB, complete genomeglycosyltransferase1e-0758.2
NC_003869:948000:9528129528129539361125Thermoanaerobacter tengcongensis MB4, complete genomepredicted glycosyltransferase1e-0758.2
NC_010175:2062932:2072543207254320736371095Chloroflexus aurantiacus J-10-fl, complete genomeglycosyl transferase group 19e-0858.2
NC_012032:2059000:2068007206800720691011095Chloroflexus sp. Y-400-fl, complete genomeglycosyl transferase group 19e-0858.2
NC_007614:261588:2730342730342741101077Nitrosospira multiformis ATCC 25196 chromosome 1, completeGlycosyl transferase, group 11e-0757.8
NC_009138:1138917:1152106115210611532331128Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative glycosyl transferases group 12e-0757.4
NC_013747:129394:1472721472721484321161Haloterrigena turkmenica DSM 5511 plasmid pHTUR04, completeglycosyl transferase group 12e-0757
NC_011761:1155636:1173252117325211744931242Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeglycoside hydrolase2e-0757
NC_010334:1783500:1798798179879817999941197Shewanella halifaxensis HAW-EB4, complete genomeglycosyl transferase group 13e-0756.6
NC_014973:1136794:1150235115023511552985064Geobacter sp. M18 chromosome, complete genomegroup 1 glycosyl transferase3e-0756.6
NC_003901:2626426:2643372264337226444781107Methanosarcina mazei Go1, complete genometransposase3e-0756.2
NC_020389:2245368:2261555226155522626611107Methanosarcina mazei Tuc01, complete genomeglycosyl transferase, group 1 family protein4e-0756.2
NC_002607:795777:8064998064998076951197Halobacterium sp. NRC-1, complete genomehypothetical protein4e-0756.2
NC_010364:787766:7984887984887996841197Halobacterium salinarum R1, complete genomeputative glycosyltransferase, type 14e-0756.2
NC_009445:7324977:7350271735027173514311161Bradyrhizobium sp. ORS 278 chromosome, complete genomeglycosyl transferase family protein4e-0756.2
NC_012969:1931595:1935541193554119367401200Methylovorus glucosetrophus SIP3-4 chromosome, complete genomegroup 1 glycosyl transferase5e-0755.8
NC_007712:1601499:1620329162032916214141086Sodalis glossinidius str. 'morsitans', complete genomeputative glycosyltransferase6e-0755.5
NC_008698:1612873:1656100165610016573801281Thermofilum pendens Hrk 5, complete genomeglycosyl transferase, group 16e-0755.5
NC_011761:1155636:1168849116884911700211173Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeglycoside hydrolase1e-0654.7
NC_012912:4012112:4028905402890540301161212Dickeya zeae Ech1591, complete genomeglycosyl transferase group 11e-0654.7
NC_014972:2371647:2386603238660323878471245Desulfobulbus propionicus DSM 2032 chromosome, complete genomegroup 1 glycosyl transferase1e-0654.7
NC_004463:6924150:6944817694481769459771161Bradyrhizobium japonicum USDA 110, complete genomeprobable glycosyl transferase1e-0654.7
NC_013592:577831:5835715835715847821212Dickeya dadantii Ech586, complete genomeglycosyl transferase group 11e-0654.3
NC_013173:3679326:3727718372771837288961179Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase group 11e-0654.3
NC_012803:691215:7245097245097257291221Micrococcus luteus NCTC 2665, complete genomeglycosyltransferase2e-0653.9
NC_016943:336550:3385333385333397711239Blastococcus saxobsidens DD2, complete genomeLipopolysaccharide biosynthesis protein2e-0653.5
NC_011894:6888562:6949870694987069511441275Methylobacterium nodulans ORS 2060, complete genomeglycosyl transferase group 12e-0653.5
NC_014500:564864:5767395767395779501212Dickeya dadantii 3937 chromosome, complete genomeputative glycosyltransferase protein2e-0653.5
NC_020272:599064:6219096219096230481140Bacillus amyloliquefaciens IT-45, complete genomegroup 1 glycosyl transferase3e-0653.1
NC_014973:1992694:2009064200906420101911128Geobacter sp. M18 chromosome, complete genomegroup 1 glycosyl transferase3e-0653.1
NC_015389:1298689:1315763131576313169291167Coriobacterium glomerans PW2 chromosome, complete genomeglycosyl transferase group 13e-0653.1
NC_016645:1677703:1693920169392016950411122Pyrobaculum sp. 1860 chromosome, complete genomegroup 1 glycosyl transferase3e-0653.1
NC_003901:1346281:1346281134628113474861206Methanosarcina mazei Go1, complete genomeglycosyltransferase3e-0653.1
NC_014733:1857020:1888084188808418892831200Methylovorus sp. MP688 chromosome, complete genomeglycosyl transferase group 15e-0652.4
NC_016631:3114000:3147598314759831487551158Granulicella mallensis MP5ACTX8 chromosome, complete genomegroup 1 glycosyl transferase6e-0652.4
NC_011071:3544450:3553274355327435543861113Stenotrophomonas maltophilia R551-3, complete genomeglycosyl transferase group 17e-0652
NC_019902:27574:3446034460356861227Thioalkalivibrio nitratireducens DSM 14787, complete genomeGlycosyltransferase8e-0651.6