Pre_GI: BLASTP Hits

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Query: NC_009664:1569335:1608265 Kineococcus radiotolerans SRS30216, complete genome

Start: 1608265, End: 1609101, Length: 837

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014484:371500:379082379082379813732Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein9e-1374.3
NC_008148:1567703:1567703156770315688031101Rubrobacter xylanophilus DSM 9941, complete genomeABC-2 type transporter2e-1066.6
NC_019673:1584739:159311315931131593967855Saccharothrix espanaensis DSM 44229 complete genomeABC-2 type transporter8e-0961.2
NC_015574:1474967:149486814948681495620753Methanobacterium sp. SWAN-1 chromosome, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B2e-0860.1
NC_015671:3211972:322941132294113230238828Cellvibrio gilvus ATCC 13127 chromosome, complete genomeABC transporter2e-0756.6
NC_016111:4245876:426739442673944268146753Streptomyces cattleya NRRL 8057, complete genomeABC transporter permease7e-0754.7
NC_015953:1983821:200307820030782003800723Streptomyces sp. SirexAA-E chromosome, complete genomeABC-2 type transporter2e-0653.5