Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1450524 Kineococcus radiotolerans SRS30216, complete genome

Start: 1450524, End: 1451915, Length: 1392

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010617:92000:9205892058935151458Kocuria rhizophila DC2201, complete genomeputrescine oxidase3e-149528
NC_012803:1094679:1111211111121111127431533Micrococcus luteus NCTC 2665, complete genomemonoamine oxidase5e-127454
NC_010397:4387500:4399332439933244007561425Mycobacterium abscessus chromosome Chromosome, complete sequencePossible putrescine oxidase2e-115416
NC_008313:886248:9086339086339101261494Ralstonia eutropha H16 chromosome 1, complete sequencemonoamine oxidase (Flavin containing)3e-37156
NC_009664:4423829:4536262453626245376411380Kineococcus radiotolerans SRS30216, complete genomeamine oxidase3e-34146
NC_020829:4390417:4415280441528044167791500Pseudomonas denitrificans ATCC 13867, complete genometwin-arginine translocation pathway signal protein9e-34145
NC_020829:4390417:4411572441157244130051434Pseudomonas denitrificans ATCC 13867, complete genomeamine oxidase3e-33143
NC_021064:2001786:2005920200592020072661347Propionibacterium avidum 44067, complete genomeputative flavin-containing amine oxidase1e-28127
NC_012673:2064298:2089060208906020900911032Exiguobacterium sp. AT1b, complete genomeamine oxidase7e-0962.4