Pre_GI: BLASTP Hits

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Query: NC_009654:304000:309532 Marinomonas sp. MWYL1, complete genome

Start: 309532, End: 310299, Length: 768

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009832:622969:642567642567643334768Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family5e-81300
NC_020126:3426439:343244534324453433212768Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator3e-57221
NC_008700:3927896:393709039370903937857768Shewanella amazonensis SB2B, complete genomeAraC-type DNA-binding domain-containing protein2e-44178
NC_009483:936000:937489937489938325837Geobacter uraniireducens Rf4 chromosome, complete genomehelix-turn-helix domain-containing protein1e-23110
NC_008543:259450:277247277247278065819Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-23109
NC_010552:293703:319588319588320406819Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-22106
NC_007511:3080849:308140230814023082220819Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-22105
NC_008391:2253188:227088422708842271702819Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, AraC family6e-22104
NC_009656:4527457:455663845566384557474837Pseudomonas aeruginosa PA7 chromosome, complete genomeputative HTH-type transcriptional regulator YeaM9e-22103
NC_007348:1903937:192325319232531923978726Ralstonia eutropha JMP134 chromosome 2, complete sequenceHelix-turn-helix, AraC type6e-21101
NC_015684:3157941:318130731813073182107801Oligotropha carboxidovorans OM5 chromosome, complete genomeAraC family transcriptional regulator2e-2099.4
NC_011386:931140:942349942349943251903Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, AraC-family3e-2099
NC_012560:201237:213263213263214153891Azotobacter vinelandii DJ, complete genomeTranscriptional regulator, AraC-family1e-1997.1
NC_021150:201237:213263213263214153891Azotobacter vinelandii CA6, complete genomeTranscriptional regulator, AraC-family1e-1997.1
NC_016027:2580477:259361925936192594443825Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator1e-1997.1
NC_011883:487187:506470506470507279810Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transcriptional regulator, AraC family1e-1894
NC_013956:1762171:178360717836071784491885Pantoea ananatis LMG 20103 chromosome, complete genomeYeaM1e-1893.6
NC_010943:2815865:283222528322252833019795Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional regulator2e-1892.8
NC_009648:1956070:196297019629701963770801Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein7e-1890.9
NC_012731:2693091:269821426982142699014801Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator8e-1890.9
NC_009040:43791:590355903559835801Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completetranscriptional regulator, AraC family2e-1789.7
NC_011283:2627050:263595226359522636752801Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator3e-1789
NC_013850:2624899:263287526328752633648774Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization1e-1687
NC_005296:5238882:525889052588905259636747Rhodopseudomonas palustris CGA009, complete genomeCUPIN domain:transcriptional regulator, AraC family1e-1687
NC_011004:5520771:554078055407805541526747Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, AraC family1e-1687
NC_014931:4234288:426418542641854264967783Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family2e-1685.9
NC_014840:76232:754807548076235756Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, AraC family4e-1685.1
NC_007492:6372900:640591764059176406774858Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family8e-1684.3
NC_014500:1862000:188072318807231881490768Dickeya dadantii 3937 chromosome, complete genomeAraC family transcriptional regulator7e-1580.9
NC_008543:90312:919879198792808822Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1480.5
NC_015947:3991696:399428339942833995086804Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator2e-1479.7
NC_015968:2110175:212686921268692127654786Enterobacter asburiae LF7a chromosome, complete genomeAraC family transcriptional regulator2e-1479.3
NC_012723:71637:914479144792229783Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTranscriptional Regulator, AraC family protein4e-1478.6
NC_011071:4000620:400570140057014006504804Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family4e-1478.6
NC_008061:2153495:217696521769652177786822Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-1477.8
NC_013850:2624899:262993326299332630700768Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization1e-1377
NC_009648:1956070:196782919678291968596768Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein1e-1376.6
NC_011283:2627050:263208426320842632851768Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator2e-1376.6
NC_016845:2729654:274359227435922744359768Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein3e-1375.9
NC_012731:2693091:270144927014492702216768Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator3e-1375.9
NC_016628:1190366:120559712055971206388792Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator3e-1375.5
NC_014839:12519:319763197632758783Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetranscriptional regulator, AraC family7e-1374.3
NC_013421:1696746:170689217068921707548657Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, AraC family9e-1373.9
NC_018524:5066720:508661950866195087341723Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein1e-1273.6
NC_014666:5449884:547133154713315472074744Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, AraC family2e-1273.2
NC_010512:866932:867480867480868280801Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, AraC family1e-1273.2
NC_014121:2514544:253240025324002533191792Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeAraC family transcriptional regulator2e-1272.8
NC_018080:1100047:111602911160291116757729Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator3e-1272.4
NC_002516:4285477:428779442877944288606813Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator3e-1272
NC_011770:1226923:124137212413721242184813Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator4e-1272
NC_008463:1223012:123718312371831237995813Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator4e-1272
NC_008228:2295841:230915323091532309944792Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, AraC family5e-1271.6
NC_014541:1753776:175619617561961756999804Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family9e-1270.5
NC_016582:3763476:376347637634763764261786Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC family transcription regulator1e-1170.1
NC_014837:33014:419974199742845849Pantoea sp. At-9b chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein1e-1170.1
NC_018691:4619245:464288746428874643687801Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator2e-1169.7
NC_014540:1835493:184139518413951842174780Burkholderia sp. CCGE1003 chromosome 2, complete sequenceAraC family transcriptional regulator2e-1169.7
NC_008752:725189:755815755815756645831Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, AraC family2e-1169.3
NC_013850:3303500:330401633040163304807792Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, AraC family3e-1168.9
NC_010694:63654:738347383474679846Erwinia tasmaniensis, complete genomeProbable transcriptional regulator3e-1168.9
NC_014973:4503054:450961545096154510385771Geobacter sp. M18 chromosome, complete genomeAraC family transcriptional regulator2e-1066.2
NC_010511:1691753:170494717049471705747801Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator2e-1065.9
NC_009792:2688747:269857326985732699328756Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0963.9
NC_009921:6483660:649183664918366492549714Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family1e-0963.9
NC_015637:325561:338615338615339502888Vibrio anguillarum 775 chromosome chromosome II, complete sequenceAraC family transcriptional regulator1e-0963.5
NC_014966:1668822:167527516752751676093819Vibrio vulnificus MO6-24/O chromosome II, complete sequenceAraC family transcripitonal regulator2e-0963.2
NC_011887:72364:951569515695977822Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, AraC family6e-0961.2
NC_014158:1479313:148723614872361488009774Tsukamurella paurometabola DSM 20162 chromosome, complete genomeAraC protein arabinose-binding/dimerization8e-0960.8
NC_014118:987889:992476992476993264789Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family1e-0860.1
NC_007802:1240989:125477712547771255535759Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family2e-0859.7
NC_015663:1869000:188558618855861886341756Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator3e-0755.8