Pre_GI: BLASTP Hits

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Query: NC_009617:234782:252522 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Start: 252522, End: 252800, Length: 279

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003210:2721559:274005227400522740333282Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-30130
NC_013316:2585666:259963425996342599909276Clostridium difficile R20291, complete genomePTS system, galactitol-specific IIb component3e-30130
NC_013315:2505792:251907825190782519353276Clostridium difficile CD196 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB3e-30130
NC_017179:2513804:252709025270902527365276Clostridium difficile BI1, complete genomePTS system galactitol-specific transporter subunit IIB3e-30130
NC_008555:2628858:264509526450952645376282Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, galactitol-specific, IIB component2e-30130
NC_003212:2814737:283100028310002831281282Listeria innocua Clip11262, complete genomehypothetical protein2e-30130
NC_014650:2417509:242851324285132428797285Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific subunit IIB1e-2098.6
NC_002570:207555:208899208899209183285Bacillus halodurans C-125, complete genomePTS system, galactitol-specific enzyme II, B component6e-1889.4
NC_003197:3971905:398366439836643983951288Salmonella typhimurium LT2, complete genomeputative periplasmic protein6e-1476.3
NC_011083:3985618:399787339978733998160288Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative IIB component of PTS system6e-1476.3
NC_003198:3855157:386484538648453865132288Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system IIB component6e-1476.3
NC_006905:3913988:392333139233313923618288Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein6e-1476.3
NC_011149:3895921:390817639081763908463288Salmonella enterica subsp. enterica serovar Agona str. SL483,putative IIB component of PTS system6e-1476.3
NC_010102:3919999:393175839317583932045288Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1476.3
NC_011080:3941909:395424839542483954535288Salmonella enterica subsp. enterica serovar Newport str. SL254,putative IIB component of PTS system6e-1476.3
NC_004631:3841975:385033538503353850622288Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative IIB component of PTS system6e-1476.3
NC_006511:3759550:377179637717963772083288Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system IIB component6e-1476.3
NC_016863:3933848:394496339449633945250288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-1476.3
NC_016860:3995445:400656040065604006847288Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system IIB protein6e-1476.3
NC_016857:3993864:400497840049784005265288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system IIB component6e-1476.3
NC_016856:3985597:399735639973563997643288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-1476.3
NC_016810:3993863:400497740049774005264288Salmonella enterica subsp. enterica serovar Typhimurium strputative IIB component of PTS system6e-1476.3
NC_011147:3755725:376747537674753767762288Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system transporter subunit IIB6e-1476.3
NC_011094:3853036:386537638653763865663288Salmonella enterica subsp. enterica serovar Schwarzengrund strPTS system transporter subunit IIB6e-1476.3
NC_012967:2105251:212764221276422127926285Escherichia coli B str. REL606 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB1e-1272
NC_008253:2198583:221485922148592215143285Escherichia coli 536, complete genomePTS system, galactitol-specific IIB component1e-1272
NC_004431:2444972:246432424643242464608285Escherichia coli CFT073, complete genomePTS system, galactitol-specific IIB component2e-1271.2
NC_013008:2824511:284359828435982843882285Escherichia coli O157:H7 str. TW14359 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB2e-1271.2
NC_017047:3793000:380869238086923808976285Rahnella aquatilis HX2 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB3e-1270.9
NC_015061:3725921:374404637440463744330285Rahnella sp. Y9602 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase3e-1270.9
NC_016818:3736213:375149537514953751779285Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-1269.3
NC_014624:1675500:176003717600371760312276Eubacterium limosum KIST612 chromosome, complete genomePTS system protein8e-1268.9
NC_013517:3948500:395185739518573952156300Sebaldella termitidis ATCC 33386, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit1e-1065.1
NC_014039:15236:250002500025302303Propionibacterium acnes SK137 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit3e-1063.9
NC_010473:4630361:463008646300864630364279Escherichia coli str. K-12 substr. DH10B, complete genomepredicted enzyme IIB component of PTS4e-1063.5
NC_000913:4528278:452827845282784528556279Escherichia coli K12, complete genomepredicted enzyme IIB component of PTS4e-1063.5
AC_000091:4534935:453493545349354535213279Escherichia coli W3110 DNA, complete genomepredicted enzyme IIB component of PTS4e-1063.5
NC_011742:4873351:487307648730764873354279Escherichia coli S88 chromosome, complete genomeenzyme IIB component of PTS; KpLE2 phage-like element4e-1063.5
NC_012759:4467288:446701344670134467291279Escherichia coli BW2952 chromosome, complete genomeputative enzyme IIB component of PTS4e-1063.5
NC_012947:3883484:390343739034373903715279Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeprotein-N(pi)-phosphohistidine--sugar phosphotransferase4e-1063.5
NC_012967:4510393:451039345103934510671279Escherichia coli B str. REL606 chromosome, complete genomeputative PTS system transporter subunit IIB4e-1063.5
NC_006085:15246:250112501125313303Propionibacterium acnes KPA171202, complete genomePTS system, galactitol-specific IIB component5e-1063.2
NC_016511:15100:248652486525167303Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system galactitol-specific transporter subunit IIB5e-1063.2
NC_016512:15102:248672486725169303Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system galactitol-specific transporter subunit IIB5e-1063.2
NC_016516:15102:248672486725169303Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system galactitol-specific transporter subunit IIB5e-1063.2
NC_014363:427393:444980444980445261282Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-1062.8
NC_015389:616430:624853624853625134282Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIB component, Gat family4e-0960.1
NC_014363:114239:122074122074122370297Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-0858.2
NC_009617:648000:652146652146652448303Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB2e-0857.8
NC_012125:3905782:391812139181213918354234Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic protein6e-0856.2
NC_017046:3991551:400380540038054004038234Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system transporter subunit IIB6e-0856.2
NC_014363:427393:435955435955436245291Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-0753.1
NC_014618:3700640:370745037074503707743294Enterobacter cloacae SCF1 chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIB1e-0652
NC_010468:1816359:182549518254951825788294Escherichia coli ATCC 8739, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-0651.6
NC_014363:8228:175101751017812303Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit3e-0650.4