Pre_GI: BLASTP Hits

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Query: NC_009512:3618055:3620858 Pseudomonas putida F1, complete genome

Start: 3620858, End: 3621943, Length: 1086

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1518113:1528950152895015300411092Pseudomonas putida F1, complete genomeprotein of unknown function DUF4533e-140498
NC_013716:3327881:3330688333068833317701083Citrobacter rodentium ICC168, complete genomehypothetical protein6e-138490
NC_014817:29795:3296232962340501089Asticcacaulis excentricus CB 48 chromosome 2, complete sequencehypothetical protein6e-104377
NC_012660:3320330:3343204334320433442861083Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein9e-85313
NC_011283:4767269:4780245478024547813001056Klebsiella pneumoniae 342 chromosome, complete genomeFldA family protein4e-84311
NC_013850:4612812:4625788462578846268431056Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF4535e-84311
NC_009655:195500:2182022182022192721071Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein1e-76286
NC_015380:717990:7234877234877245721086Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomehypothetical protein3e-75282
NC_008313:2629281:2633871263387126359102040Ralstonia eutropha H16 chromosome 1, complete sequencetwo domain protein: PF04304 and PF034013e-72272
NC_010718:2265447:2281260228126022823961137Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF4532e-64246
NC_015186:2197236:2214607221460722158481242Acidiphilium multivorum AIU301, complete genomehypothetical protein3e-62239
NC_013508:2130681:2148005214800521491621158Edwardsiella tarda EIB202, complete genomehypothetical protein2e-61236
NC_015519:426948:4377774377774389311155Tepidanaerobacter sp. Re1 chromosome, complete genomePrpF protein5e-58224
NC_016584:432610:4495024495024506411140Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein1e-57223
NC_020272:599064:6004836004836016131131Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein9e-55214
NC_020291:4033000:4040866404086640419751110Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative 3-methylitaconate isomerase3e-53209
NC_011740:3739395:3754760375476037559291170Escherichia fergusonii ATCC 35469, complete genomehypothetical protein5e-53208
NC_021150:2315362:2320924232092423221171194Azotobacter vinelandii CA6, complete genomeacnD accessory protein2e-49196
NC_012560:2315350:2320912232091223221051194Azotobacter vinelandii DJ, complete genomeacnD accessory protein2e-49196
NC_015677:1282865:1284916128491612860701155Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein4e-48192
NC_014394:93344:1157331157331169141182Gallionella capsiferriformans ES-2 chromosome, complete genomeAcnD-accessory protein PrpF2e-47189
NC_005966:2653945:2657701265770126588821182Acinetobacter sp. ADP1, complete genomehypothetical protein2e-47189
NC_016745:2161408:2164000216400021651751176Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein5e-45182
NC_015380:717990:7307577307577318901134Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomePrpF protein involved in 2-methylcitrate cycle1e-37157